Genome Analysis Toolkit (gatk) - Biotechnology

Relevant Publications

PathVar: A Customisable NGS Variant Calling Algorithm Implicates Novel Candidate Genes and Pathways in Hemiplegic Migraine.

Issue Release: 2024

Fast and accurate short-read alignment with hybrid hash-tree data structure.

Issue Release: 2024

A high-performance computational workflow to accelerate GATK SNP detection across a 25-genome dataset.

Issue Release: 2024

Single nucleotide polymorphisms conferring susceptibility to leukemia and oral mucositis: a multi-center pilot study of patients prior to conditioning therapy for hematopoietic cell transplant.

Issue Release: 2024

Homologous recombination deficiency (HRD) is associated with better prognosis and possibly causes a non-inflamed tumour microenvironment in nasopharyngeal carcinoma.

Issue Release: 2024

The Benefits of Whole-Exome Sequencing in the Differential Diagnosis of Hypophosphatasia.

Issue Release: 2024

Based on whole-exome sequencing to explore the rule of Herceptin and TKI resistance in breast cancer patients.

Issue Release: 2024

SNP-SVant: A Computational Workflow to Predict and Annotate Genomic Variants in Organisms Lacking Benchmarked Variants.

Issue Release: 2024

Whole-Exome Sequencing Detecting a Recurrent Pathogenic Mutation, p.His63Asp (H63D) in COVID-19 Patients and Its Effect on Mortality.

Issue Release: 2024

Modeling biases from low-pass genome sequencing to enable accurate population genetic inferences.

Issue Release: 2024

Fast and accurate DNASeq variant calling workflow composed of LUSH toolkit.

Issue Release: 2024

What can we infer about mutation calling by using time-series mutation accumulation data and a Bayesian Mutation Finder?

Issue Release: 2024

Identification of pathogenic variants in the Brazilian cohort with Familial Hypercholesterolemia using exon-targeted gene sequencing.

Issue Release: 2023

Personalized Pangenome References.

Issue Release: 2023

GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data.

Issue Release: 2023

Evaluation of Breast Implant-associated Anaplastic Large Cell Lymphoma With Whole Exome and Genome Sequencing.

Issue Release: 2022

iCOMIC: a graphical interface-driven bioinformatics pipeline for analyzing cancer omics data.

Issue Release: 2022

[Exploring the association between mutations and non-syndromic cleft lip with or without palate based on whole exome sequencing of case-parent trios].

Issue Release: 2022

Application of next-generation sequencing for the high-resolution typing of MHC- in Korean native chicken.

Issue Release: 2022

Variant Calling from RNA-seq Data Using the GATK Joint Genotyping Workflow.

Issue Release: 2022

Why is Monitoring Important?

What are the Consequences of Nutrient Imbalance?

How Does Biotechnology Impact Biodiversity?

What are the Limitations of Machine Learning in Biotechnology?

What is Environmental Remediation?

How to Choose the Right Biotechnology Program?

What About Forensic Databases?

How is Alfalfa Utilized in Biotechnology?

How Do Bioethical Issues Arise?

How are GMOs Created?

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